HDF-EOS in a Container on Shaheen

Owned by Kadir Akbudak
Last updated: Jul 05, 2023
1 min read

You can use HDF-EOS in a Singularity container on Shaheen as follows:

module load singularity cd $HOME && mkdir -p tmpdir export SINGULARITY_TMPDIR=$HOME/tmpdir singularity pull docker://hdfeos/hdfeos cp ~/hdfeos_latest.sif /scratch/$USER/images/ singularity run /scratch/$USER/images/hdfeos_latest.sif